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Mitochondrial DNA : methods and protocols / edited by William C. Copeland.

Contributor(s): Copeland, William C. (William Chenery)Material type: TextTextSeries: Methods in molecular biology (Clifton, N.J.): v. 197.Publisher: Totowa, N.J. : Humana Press, 2002Description: xiv, 414 pages : illustrations ; 24 cmISBN: 0896039722; 9780896039728Subject(s): Mitochondrial DNA -- Laboratory manuals | Mitochondrial DNA | DNA, Mitochondrial | ADN mitochondrial -- Manuels de laboratoire | ADN mitochondrial | Mitochondrial DNA | Genanalyse | Labortechnik | Mitochondriale DNS | Mitochondriopathie | Mitochondrien | DNA | Wetenschappelijke techniekenGenre/Form: Laboratory Manual | Aufsatzsammlung. | Laboratory manuals. | Laboratory manuals. | Manuels de laboratoire.DDC classification: 574.873282 LOC classification: QH603.M5 | M558 2002Other classification: 42.13 | WC 4150 | WC 4460 | WD 5360 Online resources: Table of contents | Table of contents | Available to Stanford-affiliated users at | Book review (E-STREAMS) | Publisher description Also available on the Internet to registered users.
Contents:
pt. 1. Methods for the analysis of mtDNA -- Animal models for mitochondrial disease / Douglas C. Wallace -- Identification of mutations in mtDNA from patients suffering mitochondrial diseases / Eric A. Schon -- Screening for aging-dependent point mutations in mtDNA / Yuichi Michikawa -- Scanning low-frequency point mutants in the mitochondrial genome using constant denaturant capillary electrophoresis / Weiming Zheng -- Identification of mtDNA mutations in human cancer / Shuji Nomoto -- In situ PCR of the common human mt DNA deletion: is it related to apoptosis? / Steven J Zullo -- Reproducible quantitative PCR of mitochondrial and nuclear DNA copy number using the LightCycler / Alice Wong -- Yeast nuclear genes for mtDNA maintenance / Francoise Foury -- Measuring mtDNA mutation rates in Saccharomyces cerevisiae using the mtArg8 assay / Micheline K. Strand -- Measuring oxidative mtDNA damage and repair using quantitative PCR / Janine H. Santos -- Migration of mtDNA into the nucleus / Mary K. Thorsness -- 2D gel electrophoresis of mtDNA / Heather E. Lorimer -- pt. 2. Methods for the analysis of proteins involved in mtDNA transactions -- Purifications of mitochondria for enzymes involved in nucleic acid transactions / Daniel F. Bogenhagen -- Purification of mitochondrial uracil-DNA glycosylase using Ugi-sepharose affinity chromatography / Samuel E. Bennett -- Characterization of specialized mtDNA glycosylases / Simon G. Nyaga -- Purification, separation, and identification of the human mtDNA polymerase with and without its accessory subunit / Matthew J. Longley -- Assay of mtDNA polymerase y from human tissues / Robert K. Naviaux -- Purification strategies for Drosophila mtDNA replication proteins in native and recombinant form: DNA polymerase y / Carol L. Farr -- Purification strategies for Drosophila mtDNA replication proteins in native and recombinant form: mitochondrial single-stranded DNA-binding protein / Carol L. Farr -- Expression, purification, and in vitro assays of mitochondrial single-stranded DNA-binding protein / Kang Li -- Recombinant yeast mtDNA helicases: purification and functional assays / Silja Kuusk -- Isolation of DNA topoisomerases I and II activities from mitochondria of mammalian heart / Robert L. Low -- Endonuclease G isolation and assays / Robert L. Low -- Targeting DNA repair proteins to mitochondria / Allison W. Dobson -- In organello footprinting of mtDNA / Steven C. Ghivizzani -- Crosslinking of proteins to mtDNA / Brett A. Kaufman -- Breeding and genotyping ot Tfam conditional knockout mice / Mats Ekstrand.
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ST Book Bank ST Book Bank GKVK Library
574.873282 COP (Browse shelf) Available STB-501

Includes bibliographical references and index.

pt. 1. Methods for the analysis of mtDNA -- Animal models for mitochondrial disease / Douglas C. Wallace -- Identification of mutations in mtDNA from patients suffering mitochondrial diseases / Eric A. Schon -- Screening for aging-dependent point mutations in mtDNA / Yuichi Michikawa -- Scanning low-frequency point mutants in the mitochondrial genome using constant denaturant capillary electrophoresis / Weiming Zheng -- Identification of mtDNA mutations in human cancer / Shuji Nomoto -- In situ PCR of the common human mt DNA deletion: is it related to apoptosis? / Steven J Zullo -- Reproducible quantitative PCR of mitochondrial and nuclear DNA copy number using the LightCycler / Alice Wong -- Yeast nuclear genes for mtDNA maintenance / Francoise Foury -- Measuring mtDNA mutation rates in Saccharomyces cerevisiae using the mtArg8 assay / Micheline K. Strand -- Measuring oxidative mtDNA damage and repair using quantitative PCR / Janine H. Santos -- Migration of mtDNA into the nucleus / Mary K. Thorsness -- 2D gel electrophoresis of mtDNA / Heather E. Lorimer -- pt. 2. Methods for the analysis of proteins involved in mtDNA transactions -- Purifications of mitochondria for enzymes involved in nucleic acid transactions / Daniel F. Bogenhagen -- Purification of mitochondrial uracil-DNA glycosylase using Ugi-sepharose affinity chromatography / Samuel E. Bennett -- Characterization of specialized mtDNA glycosylases / Simon G. Nyaga -- Purification, separation, and identification of the human mtDNA polymerase with and without its accessory subunit / Matthew J. Longley -- Assay of mtDNA polymerase y from human tissues / Robert K. Naviaux -- Purification strategies for Drosophila mtDNA replication proteins in native and recombinant form: DNA polymerase y / Carol L. Farr -- Purification strategies for Drosophila mtDNA replication proteins in native and recombinant form: mitochondrial single-stranded DNA-binding protein / Carol L. Farr -- Expression, purification, and in vitro assays of mitochondrial single-stranded DNA-binding protein / Kang Li -- Recombinant yeast mtDNA helicases: purification and functional assays / Silja Kuusk -- Isolation of DNA topoisomerases I and II activities from mitochondria of mammalian heart / Robert L. Low -- Endonuclease G isolation and assays / Robert L. Low -- Targeting DNA repair proteins to mitochondria / Allison W. Dobson -- In organello footprinting of mtDNA / Steven C. Ghivizzani -- Crosslinking of proteins to mtDNA / Brett A. Kaufman -- Breeding and genotyping ot Tfam conditional knockout mice / Mats Ekstrand.

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